yimengkong/scope9:latest

$ singularity pull shub://yimengkong/scope9:latest

Singularity Recipe

Bootstrap: docker
From: centos:centos8

%help
For more information about 6mASCOPE, please consult https://github.com/yimengkong/6mASCOPE

# Add files to the container
%setup
    cp postInstall /tmp/postInstall
    cp -r code /tmp/code


    
# Install dependencies
%post
    # Install basic dependencies
    dnf check-update && dnf upgrade -y

    dnf install -y \
        "glibc-locale-source" \
        "glibc-langpack-en" \
        "wget" \
        "bzip2" \
        "make" \
        "perl" \
        "git" \
	    "which"


    # Include 6mASCOPE toolbox
    mkdir /sc
    mkdir /home/6mASCOPE
    
    
    # Install remaining dependencies
    mv /tmp/code /home/6mASCOPE/code
    mv /tmp/postInstall /postInstall
    bash /postInstall

    # Define working directory
    cd /home/6mASCOPE
    

    # Set default behavior
    cat > /.singularity.d/env/99-custom.sh <<EOF
export PS1="\[\033[36m\]\u\[\033[m\]@\[\033[32m\]6mASCOPE:\[\033[33;1m\]\w\[\033[m\]$ "
SINGULARITY_SHELL=/bin/bash
EOF

%environment
    export HOME=/home/6mASCOPE

%runscript
    cd /home/6mASCOPE
    exec /bin/bash

%labels
    Version v0.7.27

Collection


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Metrics

key value
id /containers/yimengkong-scope9-latest
collection name yimengkong/scope9
branch master
tag latest
commit cc734fb390894e5edca8a279da59c76b7577017f
version (container hash) 716950837acdb8258ec6bcf33ea26f19
build date 2021-03-18T20:47:43.906Z
size (MB) 3173.0
size (bytes) 1223606303
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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