williamssanders/pepa:biopepa

$ singularity pull shub://williamssanders/pepa:biopepa

Singularity Recipe

Bootstrap:docker
From:centos:6

%labels
	MAINTAINER Shane Sanders
	
%files
	# Files for Build Go Here

%post
	echo "Updating system"
	yum update -y
	echo "Installing xauth and xterm"
	yum install -y xauth xterm wget unzip libXtst.x86_64 mesa-libGL.x86_64
	echo "Installing OPEN JDK 8 JRE (java-1.8.0-openjdk)"
	yum install -y java-1.8.0-openjdk
	echo "Installing GTK"
	yum install -y gtk2 libcanberra-gtk2 PackageKit-gtk-module
	cd /opt
	wget https://archive.eclipse.org/technology/epp/downloads/release/mars/2/eclipse-jee-mars-2-linux-gtk-x86_64.tar.gz
	tar xvfz eclipse-jee-mars-2-linux-gtk-x86_64.tar.gz -C /opt/
	ln -s /opt/eclipse/eclipse /usr/local/bin/eclipse
	rm eclipse-jee-mars-2-linux-gtk-x86_64.tar.gz
	# Installing PEPA || BioPEPA
	eclipse -clean -purgeHistory -noSplash -application org.eclipse.equinox.p2.director -repository https://download.eclipse.org/releases/mars/ -installIU org.eclipse.birt.feature.group/
	eclipse -clean -purgeHistory -noSplash -application org.eclipse.equinox.p2.director -repository http://www.dcs.ed.ac.uk/pepa/group/update-site -installIU uk.ac.ed.inf.common.feature.feature.group
	eclipse -clean -purgeHistory -noSplash -application org.eclipse.equinox.p2.director -repository https://download.eclipse.org/releases/mars/ -installIU org.eclipse.zest.core/
	#eclipse -clean -purgeHistory -noSplash -application org.eclipse.equinox.p2.director -repository http://www.dcs.ed.ac.uk/pepa/group/update-site -installIU uk.ac.ed.inf.pepa.feature.feature.group
	eclipse -clean -purgeHistory -noSplash -application org.eclipse.equinox.p2.director -repository http://www.dcs.ed.ac.uk/pepa/group/update-site -installIU uk.ac.ed.inf.biopepa.feature.group

%runscript
	#java -version
/opt/eclipse/eclipse

Collection


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Metrics

key value
id /containers/williamssanders-pepa-biopepa
collection name williamssanders/pepa
branch master
tag biopepa
commit fe1f07628ebfcab3dafb8833109f6063bbe11722
version (container hash) 45bce1f6c76ac2011bb06daab90c40e3
build date 2019-02-14T08:45:05.107Z
size (MB) 928
size (bytes) 544141343
SIF Download URL (please use pull with shub://)
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