willgpaik/allpaths_aci:latest

$ singularity pull shub://willgpaik/allpaths_aci:latest

Singularity Recipe

BootStrap: shub
From: shub://willgpaik/centos7_aci:latest

%setup

%files

%environment 
  export PATH=$PATH:/opt/sw/allpaths/bin

%runscript


%post
  yum -y update

  mkdir -p /opt/sw/allpaths
  cd /opt/sw
  wget ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/LATEST_VERSION.tar.gz
  tar -xf LATEST_VERSION.tar.gz
  cd allpathslg-52488
  ./configure --prefix=/opt/sw/allpaths
  make
  make install
  
  cd /opt/sw
  rm -rf allpathslg-52488
  rm LATEST_VERSION.tar.gz

Collection


View on Datalad

Metrics

key value
id /containers/willgpaik-allpaths_aci-latest
collection name willgpaik/allpaths_aci
branch master
tag latest
commit 0db8345caaec30826924552b84701129f283380e
version (container hash) d1bb036f795278935de52afe2109a4ed
build date 2020-12-12T07:21:36.824Z
size (MB) 6641
size (bytes) 2023858207
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
We cannot guarantee that all containers will still exist on GitHub.