ucr-singularity/cs172:latest
$ singularity pull shub://ucr-singularity/cs172:latest
Singularity Recipe
Bootstrap: docker
From: ubuntu:bionic
%environment
PATH=/opt/conda/bin:$PATH
export PATH
%post
# Set up the PATH for other commands
export PATH=/opt/conda/bin:$PATH
# Update list of packages then upgrade them
apt-get update
apt-get install -y apt-utils
DEBIAN_FRONTEND=noninteractive apt-get -y dist-upgrade
# Install basic packages
apt-get install -y --no-install-recommends build-essential cmake git curl vim \
ca-certificates
apt-get install -y screen terminator tmux vim wget
apt-get install -y aptitude build-essential cmake g++ gfortran git pkg-config software-properties-common
apt-get install -y unrar
apt-get install -y libzip-dev
# Clean up
apt-get -y autoremove
rm -rvf /var/lib/apt/lists/*
# Install miniconda
cd /opt
curl -o /opt/miniconda.sh -O https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh
chmod +x /opt/miniconda.sh
/opt/miniconda.sh -b -p /opt/conda
rm /opt/miniconda.sh
# Set locale in Singularity environment
echo 'export LC_ALL=C' >>$SINGULARITY_ENVIRONMENT
echo 'export PATH=/opt/conda/bin:$PATH' >>$SINGULARITY_ENVIRONMENT
Collection
- Name: ucr-singularity/cs172
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/ucr-singularity-cs172-latest |
collection name | ucr-singularity/cs172 |
branch | master |
tag | latest |
commit | 2d5771767948935389b53b01737b393035b90995 |
version (container hash) | af0324026ce980018626d989034673a4 |
build date | 2018-12-04T16:31:44.394Z |
size (MB) | 1027 |
size (bytes) | 388698143 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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