tobsecret/singularity_containers:latest
$ singularity pull shub://tobsecret/singularity_containers:latest
Singularity Recipe
Bootstrap: docker
From: continuumio/miniconda3:4.6.14
%labels
AUTHOR tobi.schraink@gmail.com
%environment
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
# This sets global environment variables for anything run within the container
export PATH="/opt/conda/bin:/usr/local/bin:/usr/bin:/bin:"
unset CONDA_DEFAULT_ENV
export ANACONDA_HOME=/opt/conda
%post
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
# This is going to be executed after the base container has been downloaded
export PATH=/opt/conda/bin:$PATH
conda install --yes bioconda::bioconductor-signer=1.8.0 conda-forge::dask=1.2.2 bioconda::tabix=0.2.6 bioconda::bioconductor-somaticsignatures=2.18.0
Collection
- Name: tobsecret/singularity_containers
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/tobsecret-singularity_containers-latest |
collection name | tobsecret/singularity_containers |
branch | master |
tag | latest |
commit | 77745d0c51c0155b1b4127b8aa664d19061982b4 |
version (container hash) | 7390be6b2a1c94238d4945fe6a8fe41d |
build date | 2019-06-07T11:19:42.482Z |
size (MB) | 3199 |
size (bytes) | 1526845471 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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