tkolisnik/singularity-for-crc-ml:latest

$ singularity pull shub://tkolisnik/singularity-for-crc-ml:latest

Singularity Recipe

#August 5 2019
# Filename: Singularity
Bootstrap: docker
From: continuumio/miniconda3:4.6.14

%labels
   AUTHOR tkolisnik@gmail.com
   
############################################################################
# This sets global environment variables for anything run within the container
############################################################################

%environment
  export PATH="/opt/conda/bin:/usr/local/bin:/usr/bin:/bin:"
  unset CONDA_DEFAULT_ENV
  export ANACONDA_HOME=/opt/conda

################################
# Additional packages to install 
################################

%post
   export PATH=/opt/conda/bin:$PATH
   echo "Add conda channels."
   conda config --add channels defaults
   conda config --add channels conda-forge
   conda install --yes scikit-learn scipy matplotlib pandas numpy rpy2 libgfortran
   conda update libgfortran --force
   conda clean --index-cache --tarballs --packages --yes

Collection


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Metrics

key value
id /containers/tkolisnik-singularity-for-crc-ml-latest
collection name tkolisnik/singularity-for-crc-ml
branch master
tag latest
commit 2a64f635b0fa61ae47a96b1b84e6f0c0f9354c13
version (container hash) 690044f83ee0a778042857e58d630963
build date 2019-08-06T06:33:22.895Z
size (MB) 1984.0
size (bytes) 636063775
SIF Download URL (please use pull with shub://)
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Singularity Recipe Singularity Recipe on Datalad
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