timothyas/data-driven-collab:latest
$ singularity pull shub://timothyas/data-driven-collab:latest
Singularity Recipe
Bootstrap: docker
From: nvcr.io/nvidia/cuda:10.1-cudnn7-devel-ubuntu18.04
%environment
# these two are not critical on Hera, oh well
export CUDA_HOME=/apps/cuda/cuda-10.1
export XLA_FLAGS=--xla_gpu_cuda_data_dir=/apps/cuda/cuda-10.1
%post
# Install some basics
apt-get update -y --fix-missing
DEBIAN_FRONTEND=noninteractive apt-get install -y --no-install-recommends \
apt-transport-https \
ca-certificates \
gnupg \
wget \
bzip2 \
curl \
git \
python3.8 \
python3-pip \
python3-setuptools \
python3-dev \
python3-venv \
python3-wheel
# Cleanup
apt-get clean
rm -rf /var/lib/apt/lists/*
# NVIDIA Nsight Systems 2020.3.2
# this is the version that was on the NVIDIA machine
wget -qO - https://developer.download.nvidia.com/compute/cuda/repos/ubuntu1804/x86_64/7fa2af80.pub | apt-key add -
echo "deb https://developer.download.nvidia.com/devtools/repo-deb/x86_64/ /" >> /etc/apt/sources.list.d/nsight.list
apt-get update -y
DEBIAN_FRONTEND=noninteractive apt-get install -y --no-install-recommends \
nsight-systems-2020.3.2
rm -rf /var/lib/apt/lists/*
# Install all packages via pip
python3.8 -m pip install --upgrade pip
python3.8 -m pip install --upgrade setuptools
python3.8 -m pip install --upgrade numpy scipy coverage xarray dask future numba
python3.8 -m pip install --upgrade matplotlib seaborn
python3.8 -m pip install --upgrade networkx scikit-learn
python3.8 -m pip install --upgrade cupy-cuda101
python3.8 -m pip install --upgrade jax jaxlib==0.1.59+cuda101 -f https://storage.googleapis.com/jax-releases/jax_releases.html
# soft link python -> python3
ln -s /usr/bin/python3.8 /usr/bin/python
Collection
- Name: timothyas/data-driven-collab
- License: GNU General Public License v3.0
View on Datalad
Metrics
key | value |
---|---|
id | /containers/timothyas-data-driven-collab-latest |
collection name | timothyas/data-driven-collab |
branch | master |
tag | latest |
commit | 9ba52434df7cdda346805ba81757ca873ee44896 |
version (container hash) | e022473b11f59ed5ea6e83b5136d3fd6 |
build date | 2021-02-11T03:10:07.810Z |
size (MB) | 5649.0 |
size (bytes) | 3151859743 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
Feedback
Was this page helpful?
Glad to hear it! Please tell us how we can improve.
Sorry to hear that. Please tell us how we can improve.