sschmeier/simg-rseqc:latest
$ singularity pull shub://sschmeier/simg-rseqc:latest
Singularity Recipe
Bootstrap: docker
From: continuumio/miniconda2:4.5.11
%labels
AUTHOR schmeier@tuta.io
%environment
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
# This sets global environment variables for anything run within the container
export PATH="/opt/conda/bin:/usr/local/bin:/usr/bin:/bin:"
unset CONDA_DEFAULT_ENV
export ANACONDA_HOME=/opt/conda
%post
export PATH=/opt/conda/bin:$PATH
echo "We add conda channels."
conda config --add channels defaults
conda config --add channels conda-forge
conda config --add channels bioconda
echo "We install tools."
conda install --yes rseqc=2.6.4
conda clean --index-cache --tarballs --packages --yes
Collection
- Name: sschmeier/simg-rseqc
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/sschmeier-simg-rseqc-latest |
collection name | sschmeier/simg-rseqc |
branch | master |
tag | latest |
commit | e751f93da3a00efc817f383fdf1b9185035fc77b |
version (container hash) | 94bc05d296611bb63bca45acff03f9dca8a89422ee161e629c59c96e0b06c65d |
build date | 2019-11-05T06:26:45.291Z |
size (MB) | 431.75 |
size (bytes) | 452722688 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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