sghignone/MrBayes:latest

$ singularity pull shub://sghignone/MrBayes:latest

Singularity Recipe

Bootstrap: docker
From: alpine:latest

%post
	export MPICH_VERSION="3.2"
	export MPICH_CONFIGURE_OPTIONS="--disable-fortran"
	export MPICH_MAKE_OPTIONS

	apk update && apk upgrade \
	&& apk add --no-cache sudo build-base \
	git g++ make automake autoconf

	#install MPI
	mkdir /tmp/mpich-src
	cd /tmp/mpich-src
	wget http://www.mpich.org/static/downloads/${MPICH_VERSION}/mpich-${MPICH_VERSION}.tar.gz \
	&& tar -xzf mpich-${MPICH_VERSION}.tar.gz \
	&& cd mpich-${MPICH_VERSION} \
	&& ./configure ${MPICH_CONFIGURE_OPTIONS} \
	&& make ${MPICH_OPTIONS} && make install \
	&& rm -rf /tmp/mpich-src/

	#install MrBayes
	mkdir /tmp/mrbayes
	cd /tmp/mrbayes
	git clone --depth=1 https://github.com/NBISweden/MrBayes.git
	cd MrBayes/ \
	&& ./configure --with-mpi --without-beagle \
	&& make && make install \
	&& rm -rf /tmp/mrbayes

%labels
	author Stefano Ghignone
	maintainer sghignone
	name MrBayes
	version v3.2.7a

Collection

• Name: sghignone/MrBayes
• License: None

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