scicore-unibas-ch/singularity-container-freesurfer:latest
$ singularity pull shub://scicore-unibas-ch/singularity-container-freesurfer:latest
Singularity Recipe
Bootstrap: docker
From: centos:7
%post
# bring up to date
yum -y update
# install the dependencies
yum -y install epel-release
yum install -y \
bc \
git \
wget \
tcsh \
libblas \
liblapack \
zlib1g \
libxmu \
libxi \
libxt \
libx11 \
libglu1-mesa
# Uncompress FreeSurfer tarball to /usr/local/
wget -c https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/6.0.0/freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0.tar.gz -O - | \
tar -xz -C /usr/local/
%environment
export FREESURFER_HOME=/usr/local/freesurfer
source $FREESURFER_HOME/SetUpFreeSurfer.sh
Collection
- Name: scicore-unibas-ch/singularity-container-freesurfer
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/scicore-unibas-ch-singularity-container-freesurfer-latest |
collection name | scicore-unibas-ch/singularity-container-freesurfer |
branch | master |
tag | latest |
commit | bee76ed8a6c77f5996975173797dc5662e69a70e |
version (container hash) | ede9b68517f4090f2a69fb414b55ea57c076b65d5002434a54362f46687509e9 |
build date | 2020-02-13T21:55:44.106Z |
size (MB) | 4398.25390625 |
size (bytes) | 4611903488 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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