rpolicastro/chip_downsampling:latest

$ singularity pull shub://rpolicastro/chip_downsampling:latest

Singularity Recipe

Bootstrap: docker
From: continuumio/miniconda3

%post

## Add conda to path
export PATH=$PATH:/opt/conda/bin

## Update conda
conda update -n base -y -c defaults conda

## Install chipseq-automation software
conda create -n chip-downsampling -y -c conda-forge -c bioconda \
r-getopt samtools bioconductor-rsubread macs2

## Update chipseq-automation environment
conda update -n chip-downsampling -y -c conda-forge -c bioconda --all

## Clean up extra files
conda clean --all

Collection


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Metrics

key value
id /containers/rpolicastro-chip_downsampling-latest
collection name rpolicastro/chip_downsampling
branch dev
tag latest
commit 96ba7a5e2c589c727fef5109a1fe3cebd5f4cf1f
version (container hash) 9f0202cd088299b924e3c8dd8f4bc036
build date 2020-03-06T14:32:37.862Z
size (MB) 1507
size (bytes) 518557727
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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