romxero/r_magick_singularity:latest

$ singularity pull shub://romxero/r_magick_singularity:latest

Singularity Recipe

Bootstrap: docker
From: ubuntu:bionic

%labels
Author "Randall Cab White - rcwhite@stanford.edu"


#############
#%setup
############

#Downlaod packages
%post
  apt-get -ym update
    ln -fs /usr/share/zoneinfo/America/Los_Angeles /etc/localtime
    apt-get install -y tzdata
    dpkg-reconfigure --frontend noninteractive tzdata


          apt-get -ymq install wget libatlas3-base curl make tar gzip gfortran gcc g++ git cmake build-essential libreadline-dev libx11-dev libxt-dev libbz2-dev liblzma-dev \
          ca-certificates libcairo2 unzip zip libtcl8.6 ucf libtk8.6 libpcre3-dev libpcre++-dev libcurl4-openssl-dev  autotools-dev  automake autoconf autogen pkg-config libgtk-3-dev sqlite3 libsqlite3-dev libudunits2-dev \
           software-properties-common build-essential ca-certificates \
            git make cmake wget unzip libtool automake \
            zlib1g-dev libsqlite3-dev pkg-config sqlite3 \
            libcharls-dev libopenjp2-7-dev libcairo2-dev \

  apt-get -ymq install wget libatlas3-base curl make tar gzip default-jdk default-jre build-essential imagemagick libmagick++-dev git-all libssl-dev libpcre2-dev
  cd /
  wget https://cran.r-project.org/src/base/R-4/R-4.0.2.tar.gz
  tar zxvf R-4.0.2.tar.gz
  cd R*
  ./configure
  make -j4
  make install
  make clean
%environment
  export IMAGE_NAME="gcc"
#%runscript
#       /firefox/firefox-bin


#

Collection

• Name: romxero/r_magick_singularity
• License: None

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