rkalyanapurdue/geoedf-connector:latest
$ singularity pull shub://rkalyanapurdue/geoedf-connector:latest
Singularity Recipe
BootStrap: docker
From: continuumio/miniconda3
%files
framework/ /tmp
faoinput/ /tmp
datetimefilter/ /tmp
pathfilter/ /tmp
nasainput /tmp
run-workflow-stage.sh /usr/local/bin/
%environment
export PYTHONPATH=/usr/local/lib/python3.7/dist-packages:$PYTHONPATH
export PATH=/opt/conda/bin:/opt/conda/envs/faoinput/bin:/opt/conda/envs/datetimefilter/bin:/opt/conda/envs/nasainput/bin:/opt/conda/envs/pathfilter/bin:$PATH
%post
apt-get update && apt-get -y install python3-pip wget curl
cd /tmp/framework && pip3 install .
chmod -R go+rX /usr/local/lib/python3.7/dist-packages
chmod a+x /usr/local/bin/run-workflow-stage.sh
chmod a+x /usr/local/bin/merge.py
chmod a+x /usr/local/bin/collect.py
export PATH=/opt/conda/bin:$PATH
echo ". /opt/conda/etc/profile.d/conda.sh" >> ~/.bashrc
conda create --name faoinput
cd /tmp/faoinput && conda install -n faoinput pip && conda run -n faoinput /opt/conda/envs/faoinput/bin/pip install .
conda create --name datetimefilter
cd /tmp/datetimefilter && conda install -n datetimefilter pip && conda run -n datetimefilter /opt/conda/envs/datetimefilter/bin/pip install .
conda create --name pathfilter
cd /tmp/pathfilter && conda install -n pathfilter pip && conda run -n pathfilter /opt/conda/envs/pathfilter/bin/pip install .
conda create --name nasainput
cd /tmp/nasainput && conda install -n nasainput pip && conda run -n nasainput /opt/conda/envs/nasainput/bin/pip install .
Collection
- Name: rkalyanapurdue/geoedf-connector
- License: MIT License
View on Datalad
Metrics
key | value |
---|---|
id | /containers/rkalyanapurdue-geoedf-connector-latest |
collection name | rkalyanapurdue/geoedf-connector |
branch | master |
tag | latest |
commit | e577019c365f4d5bf83ef27b4376fa13d1f6751a |
version (container hash) | cc4e45c7919739d37aedb9a1e5f09fbd |
build date | 2020-04-05T22:31:28.359Z |
size (MB) | 1584.0 |
size (bytes) | 704831519 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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