remyd1/ubuntu-r-base:src-from-shub-with-rjags

$ singularity pull shub://remyd1/ubuntu-r-base:src-from-shub-with-rjags

Singularity Recipe

Bootstrap: shub
From: shub://singularity-hub.org/remyd1/ubuntu-r-base:src-bioconductor


%environment
  R_VERSION=3.4.3
  export R_VERSION
  R_CONFIG_DIR=/etc/R/
  export R_CONFIG_DIR

%labels
  Author Remy Dernat
  Version v0.0.1
  R_Version 3.4.3
  build_date 2018 Feb 09
  R_bioconductor True

%apprun R
  exec R "$@"

%apprun Rscript
  exec Rscript "$@"

%runscript
  exec R "$@"

%post
  NPROCS=`awk '/^processor/ {s+=1}; END{print s}' /proc/cpuinfo`
  apt-get install -y jags
  # installing some packages
  echo install.packages\(\"rjags\"\, repos\=\'https://cloud.r-project.org\'\, Ncpus\=${NPROCS}\) | R --slave

Collection


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key value
id /containers/remyd1-ubuntu-r-base-src-from-shub-with-rjags
collection name remyd1/ubuntu-r-base
branch master
tag src-from-shub-with-rjags
commit b705565187cb07168ce69dcf0ee5e774b6761952
version (container hash) 328c70d92754dcc2bb0e0a821ba409a0
build date 2018-04-11T17:52:04.816Z
size (MB) 1320
size (bytes) 482037791
SIF Download URL (please use pull with shub://)
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