qbicsoftware/qbic-singularity-trimgalore:v0.4.5

$ singularity pull shub://qbicsoftware/qbic-singularity-trimgalore:v0.4.5

Singularity Recipe

Bootstrap:docker
From:alpine:3.6

%post
/bin/sh build.sh
pip install cutadapt==1.14
DEST_DIR=/opt/
mkdir -p ${DEST_DIR}
cd /opt/
wget https://github.com/FelixKrueger/TrimGalore/archive/0.4.5.zip
unzip 0.4.5.zip
rm 0.4.5.zip
ln -s /opt/TrimGalore-0.4.5/trim_galore /usr/bin/trim_galore

%files
#Installation of tool
build.sh

%environment
#Set your toolname here and the appropriate version to have this in the metadata of your container
trimgalore_VERSION=v0.4.5



%labels
Maintainer	alexander.peltzer@uni-tuebingen.de

Collection


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Metrics

key value
id /containers/qbicsoftware-qbic-singularity-trimgalore-v0.4.5
collection name qbicsoftware/qbic-singularity-trimgalore
branch master
tag v0.4.5
commit 0c6540ceda902337476f9bffc5879e52f1f82b14
version (container hash) 682749f1d4112616412514eaa20d96b6
build date 2017-12-08T13:31:57.423Z
size (MB) 310
size (bytes) 112795679
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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