qbicsoftware/qbic-singularity-trimgalore:latest
$ singularity pull shub://qbicsoftware/qbic-singularity-trimgalore:latest
Singularity Recipe
Bootstrap:docker
From:alpine:3.6
%post
/bin/sh build.sh
pip install cutadapt==1.14
DEST_DIR=/opt/
mkdir -p ${DEST_DIR}
cd /opt/
wget https://github.com/FelixKrueger/TrimGalore/archive/0.4.5.zip
unzip 0.4.5.zip
rm 0.4.5.zip
ln -s /opt/TrimGalore-0.4.5/trim_galore /usr/bin/trim_galore
%files
#Installation of tool
build.sh
%environment
#Set your toolname here and the appropriate version to have this in the metadata of your container
trimgalore_VERSION=v0.4.5
%labels
Maintainer alexander.peltzer@uni-tuebingen.de
Collection
- Name: qbicsoftware/qbic-singularity-trimgalore
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/qbicsoftware-qbic-singularity-trimgalore-latest |
collection name | qbicsoftware/qbic-singularity-trimgalore |
branch | master |
tag | latest |
commit | 0c6540ceda902337476f9bffc5879e52f1f82b14 |
version (container hash) | 26cbfe6af668698623f20902e1010771 |
build date | 2017-12-08T13:31:57.416Z |
size (MB) | 310 |
size (bytes) | 112795679 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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