psychoinformatics-de/cbbs-toolbox:fsl

$ singularity pull shub://psychoinformatics-de/cbbs-toolbox:fsl

Singularity Recipe

Bootstrap:docker
From:neurodebian:non-free

%post
    echo "Configuring the environment"
    apt-get -y update

    # setup the container sources themselves
    apt-get -y install eatmydata
    # proper locale setup for UTF8
    eatmydata apt-get -y install locales
    echo "en_US.UTF-8 UTF-8" >> /etc/locale.gen
    locale-gen

    # the least possible bit of FSL
    eatmydata apt-get -y install --no-install-recommends fsl-5.0-core fsl-mni152-templates

    # and some dependencies that it doesnt declare...shame!
    eatmydata apt-get -y install --no-install-recommends file

    # clean up
    apt-get clean

    # inject FSL setup
    # Note: (ben) Not sure. Taken from github.com/myyoda/ohbm-training/blob/master/section23/environments/Singularity.fsl
    ln -fs /etc/fsl/5.0/fsl.sh /.singularity.d/env/99-fsl.sh

Collection


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Metrics

key value
id /containers/psychoinformatics-de-cbbs-toolbox-fsl
collection name psychoinformatics-de/cbbs-toolbox
branch master
tag fsl
commit 8fa2822797f001f1da216855a332d7878c5fa8b7
version (container hash) 4984c01e667b38d206a9a36acf5721be
build date 2018-12-14T10:38:28.275Z
size (MB) 647
size (bytes) 273367071
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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