powerPlant/pblat-srf:latest

$ singularity pull shub://powerPlant/pblat-srf:latest

Singularity Recipe

Bootstrap: docker
From: ubuntu:bionic

%labels
Maintainer eric.burgueno@plantandfood.co.nz
Version 2.1

%post
  ## Download build prerequisites
  apt-get update
  apt-get -y install gcc libssl-dev make wget zlib1g-dev

  ## Build
  cd /opt
  wget https://github.com/icebert/pblat/archive/2.1.tar.gz
  tar -xzf 2.1.tar.gz
  cd pblat-2.1
  make

  ## Install
  install pblat /usr/local/bin

  ## Cleanup
  cd
  rm -rf /opt/*
  apt-get -y remove gcc libssl-dev make wget zlib1g-dev
  apt-get -y autoremove
  apt-get -y clean all

%runscript
  exec pblat "$@"

Collection

• Name: powerPlant/pblat-srf
• License: None

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