powerPlant/nextgenmap-srf:latest

$ singularity pull shub://powerPlant/nextgenmap-srf:latest

Singularity Recipe

Bootstrap: docker
From: ubuntu:bionic

%labels
Maintainer eric.burgueno@plantandfood.co.nz
Version v0.5.5

%post
  ## Download build prerequisites
  buildDeps='git wget gcc g++ libc6-dev make cmake zlib1g-dev ca-certificates' && \
  apt-get update && apt-get install -y $buildDeps --no-install-recommends
  update-ca-certificates
  git clone https://github.com/Cibiv/NextGenMap.git && cd NextGenMap && git checkout v0.5.5 && mkdir -p build && cd build && cmake .. && make && cp -r ../bin/ngm-*/* /usr/bin/ && cd .. && rm -rf NextGenMap
  chmod 755 /usr/bin/ngm*

  ## Cleanup
  rm -rf /var/lib/apt/lists/* && \
  apt-get purge -y --auto-remove $buildDeps 
  apt-get -y clean all

%runscript
  ngm "$@"

Collection

• Name: powerPlant/nextgenmap-srf
• License: None

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