poojabhat1690/rRequirements:latest

$ singularity pull shub://poojabhat1690/rRequirements:latest

Singularity Recipe

BootStrap: docker
From:ubuntu:16.04


%post

        apt-get -y update
        apt-get install -y tzdata && \
        apt-get install -y software-properties-common && \
        add-apt-repository -y -u ppa:certbot/certbot && \
        apt-get install -y libopenblas-dev  libcurl4-openssl-dev libopenmpi-dev openmpi-bin openmpi-common openmpi-doc openssh-client openssh-server libssh-dev wget vim git nano git cmake  gfortran g++ curl wget python autoconf bzip2 libtool libtool-bin r-base-core libxml2-dev



R --slave -e 'source("https://bioconductor.org/biocLite.R")'
R --slave -e 'BiocInstaller::biocLite(c("GenomicRanges"))'
R --slave -e 'BiocInstaller::biocLite(c("biomaRt"))'
R --slave -e 'BiocInstaller::biocLite(c("Biostrings"))'
R --slave -e 'install.packages(c("checkmate", "ggplot2","reshape","dplyr","plyr","tibble"), repos="https://cloud.r-project.org/")'


%environment
export LC_ALL=C
export PATH=$PATH

Collection


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Metrics

key value
id /containers/poojabhat1690-rRequirements-latest
collection name poojabhat1690/rRequirements
branch master
tag latest
commit 99fa51de2984f162506d6e5405ea938e57244467
version (container hash) 65dbce3b41e637d2f67fa6b730a76bd1
build date 2019-10-09T07:41:25.311Z
size (MB) 1284.0
size (bytes) 454885407
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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