phgenomics-singularity/multi_assembler_singularity:latest

$ singularity pull shub://phgenomics-singularity/multi_assembler_singularity:latest

Singularity Recipe

Bootstrap: docker
From: continuumio/miniconda3:4.5.4

%help
A Singularity image for chewBBACA v 2.0.16

%labels
Maintainer Kristy Horan
Build 1.1

%post
	export PATH=/opt/conda/bin:$PATH

	conda config --add channels defaults
	conda config --add channels bioconda
	conda config --add channels conda-forge

	conda install shovill

%environment
	export PYTHONNOUSERSITE=NO
        export PYTHONPATH=/opt/conda/lib/python3.6/site-packages

%runscript
        echo " A container for shovill "
        

%test
	export PATH=/opt/conda/bin:$PATH
	shovill --check

Collection


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Metrics

key value
id /containers/phgenomics-singularity-multi_assembler_singularity-latest
collection name phgenomics-singularity/multi_assembler_singularity
branch master
tag latest
commit 95a4a8c4c9869ca1cc2ffaf24b1e5c4e5376465a
version (container hash) dda16465f5664962c49d0e5a296172e3
build date 2018-11-26T17:12:52.807Z
size (MB) 2836
size (bytes) 1358606367
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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