phgenomics-singularity/multi_assembler_singularity:latest
$ singularity pull shub://phgenomics-singularity/multi_assembler_singularity:latest
Singularity Recipe
Bootstrap: docker
From: continuumio/miniconda3:4.5.4
%help
A Singularity image for chewBBACA v 2.0.16
%labels
Maintainer Kristy Horan
Build 1.1
%post
export PATH=/opt/conda/bin:$PATH
conda config --add channels defaults
conda config --add channels bioconda
conda config --add channels conda-forge
conda install shovill
%environment
export PYTHONNOUSERSITE=NO
export PYTHONPATH=/opt/conda/lib/python3.6/site-packages
%runscript
echo " A container for shovill "
%test
export PATH=/opt/conda/bin:$PATH
shovill --check
Collection
- Name: phgenomics-singularity/multi_assembler_singularity
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/phgenomics-singularity-multi_assembler_singularity-latest |
collection name | phgenomics-singularity/multi_assembler_singularity |
branch | master |
tag | latest |
commit | 95a4a8c4c9869ca1cc2ffaf24b1e5c4e5376465a |
version (container hash) | dda16465f5664962c49d0e5a296172e3 |
build date | 2018-11-26T17:12:52.807Z |
size (MB) | 2836 |
size (bytes) | 1358606367 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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