peterk87/nf-biohansel-snippy-comparison:latest

$ singularity pull shub://peterk87/nf-biohansel-snippy-comparison:latest

Singularity Recipe

Bootstrap:docker
From:continuumio/miniconda3:4.6.14

%labels
    MAINTAINER Peter Kruczkiewicz
    DESCRIPTION Singularity image containing all requirements for the peterk87/nf-biohansel-snippy-comparison pipeline
    VERSION 1.0.0

%environment
    #export LC_ALL=C
    export PATH=/opt/conda/envs/nf-biohansel-snippy-comparison-1.0.0/bin:$PATH

%files
    environment.yml /

%post
    export PATH=/opt/conda/bin:$PATH
    conda info
    apt-get update --fix-missing && apt-get install -y procps curl locales && apt-get clean -y
    sed -i -e 's/# en_US.UTF-8 UTF-8/en_US.UTF-8 UTF-8/' /etc/locale.gen && \
        echo 'LANG="en_US.UTF-8"'>/etc/default/locale && \
        dpkg-reconfigure --frontend=noninteractive locales && \
        update-locale LANG=en_US.UTF-8
    locale
    conda install conda=4.7.12
    conda env create -f /environment.yml
    conda clean -a

Collection


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Metrics

key value
id /containers/peterk87-nf-biohansel-snippy-comparison-latest
collection name peterk87/nf-biohansel-snippy-comparison
branch master
tag latest
commit d063929c5631c5f55cf2cf83ee5775d3b02f52ec
version (container hash) ec3f1588ecce2e423d0f80441e326139
build date 2019-10-21T15:46:11.674Z
size (MB) 3068.0
size (bytes) 1035694111
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
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