pchengi/cmorfixer_env:latest
$ singularity pull shub://pchengi/cmorfixer_env:latest
Singularity Recipe
Bootstrap: docker
From: debian
%files
scripts/ /opt/
cmor_fixer/ /opt/
%post
apt-get update && apt-get install -y git wget make libssl-dev libpython3-dev build-essential vim screen bash
cd /opt/cmor_fixer
export SHELL=/bin/bash
git clone https://github.com/pchengi/cmor-fixer.git
wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh
bash Miniconda3-latest-Linux-x86_64.sh -b -u -p /opt/cmor_fixer/miniconda3
echo 'miniconda3path=/opt/cmor_fixer/miniconda3/' >>/etc/bashrc
echo "alias activateminiconda3='source /opt/cmor_fixer/miniconda3/etc/profile.d/conda.sh'" >>/etc/bashrc
/bin/bash -c 'source /etc/bashrc'
/bin/bash -c 'source /opt/cmor_fixer/miniconda3/etc/profile.d/conda.sh'
/bin/bash -c '/opt/cmor_fixer/miniconda3/bin/conda update -y -n base -c defaults conda'
cd cmor-fixer && git checkout check-output-filename
/bin/bash -c '/opt/cmor_fixer/miniconda3/bin/conda env create -f environment.yml'
Collection
- Name: pchengi/cmorfixer_env
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/pchengi-cmorfixer_env-latest |
collection name | pchengi/cmorfixer_env |
branch | master |
tag | latest |
commit | 65a35041f4f8f8f31da50fb3f667b41b3fee25a9 |
version (container hash) | ae4eab894817a871bae324bfd2898512 |
build date | 2021-01-21T18:18:31.626Z |
size (MB) | 1991.0 |
size (bytes) | 845430815 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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