ous-uio-bioinfo-core/containerised_ATACseq_pipeline:multiqc

$ singularity pull shub://ous-uio-bioinfo-core/containerised_ATACseq_pipeline:multiqc

Singularity Recipe

Bootstrap: docker
From: ubuntu:bionic-20191029
#From: ubuntu:18.04

%environment
	CONDA="/usr/local/miniconda3/bin"
	export PATH="${CONDA}:${PATH}"

%post
	apt-get update && apt-get install -y wget
      wget https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh
	bash Miniconda3-latest-Linux-x86_64.sh -b -f -u -p /usr/local/miniconda3
	rm Miniconda3-latest-Linux-x86_64.sh

	CONDA="/usr/local/miniconda3/bin"
	export PATH=${CONDA}:${PATH}

	conda config --add channels bioconda

	conda install -y \
		multiqc=0.9.1a0 \
		python=2.7.18
		
	echo "PATH=${PATH}"

	mkdir /cluster /work /tsd /projects

%runscript
	echo "Running ubuntu bionic container with multiqc v0.9.1a0, python v2.7.18"
	exec /bin/bash "$@"

Collection


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Metrics

key value
id /containers/ous-uio-bioinfo-core-containerised_ATACseq_pipeline-multiqc
collection name ous-uio-bioinfo-core/containerised_ATACseq_pipeline
branch master
tag multiqc
commit addddc48c9f55ecbbbfb9b49b96e9b2f89f5aa34
version (container hash) abc1e3d63b41937e59cc11010aba28f066957a32f4f9c8c3f7f73c87f458be7d
build date 2021-03-06T01:05:41.816Z
size (MB) 1063.60546875
size (bytes) 1115271168
SIF Download URL (please use pull with shub://)
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