natacha-beck/containers:fsl-5

$ singularity pull shub://natacha-beck/containers:fsl-5

Singularity Recipe

Bootstrap: docker
From: neurodebian:artful-non-free

%labels
  Maintainer Natacha Beck

%help
This container execute any fsl-core command it contain all the fsl data too. 
For more information see FSL website: https://fsl.fmrib.ox.ac.uk/fsl/fslwiki

%post
  apt-get update
  apt-get install -y fsl-complete

%environment
  export FSLDIR=/usr/share/fsl/5.0 
  export FSLOUTPUTTYPE=NIFTI_GZ 
  export PATH=/usr/lib/fsl/5.0:$PATH 
  export FSLMULTIFILEQUIT=TRUE 
  export POSSUMDIR=/usr/share/fsl/5.0 
  export LD_LIBRARY_PATH=/usr/lib/fsl/5.0:$LD_LIBRARY_PATH 
  export FSLTCLSH=/usr/bin/tclsh 
  export FSLWISH=/usr/bin/wish 
  export FSLOUTPUTTYPE=NIFTI_GZ

Collection


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Metrics

key value
id /containers/natacha-beck-containers-fsl-5
collection name natacha-beck/containers
branch master
tag fsl-5
commit 40b00b2d316979eacf391bf66fb9d1571213edab
version (container hash) de3da7e0a2d27b50e961717fb1565b35
build date 2018-08-09T15:28:12.807Z
size (MB) 1901
size (bytes) 1460129823
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
We cannot guarantee that all containers will still exist on GitHub.