natacha-beck/cbrain-containers-recipes:fsl-5
$ singularity pull shub://natacha-beck/cbrain-containers-recipes:fsl-5
Singularity Recipe
Bootstrap: docker
From: neurodebian:artful-non-free
%labels
Maintainer Natacha Beck
%help
This container execute any fsl-core command it contain all the fsl data too.
For more information see FSL website: https://fsl.fmrib.ox.ac.uk/fsl/fslwiki
%post
apt-get update
apt-get install -y fsl-complete
%environment
export FSLDIR=/usr/share/fsl/5.0
export FSLOUTPUTTYPE=NIFTI_GZ
export PATH=/usr/lib/fsl/5.0:$PATH
export FSLMULTIFILEQUIT=TRUE
export POSSUMDIR=/usr/share/fsl/5.0
export LD_LIBRARY_PATH=/usr/lib/fsl/5.0:$LD_LIBRARY_PATH
export FSLTCLSH=/usr/bin/tclsh
export FSLWISH=/usr/bin/wish
export FSLOUTPUTTYPE=NIFTI_GZ
Collection
View on Datalad
Metrics
key | value |
---|---|
id | /containers/natacha-beck-cbrain-containers-recipes-fsl-5 |
collection name | natacha-beck/cbrain-containers-recipes |
branch | fct |
tag | fsl-5 |
commit | 8dd3a8d6df6dd9da0183e2556035d03c9c750764 |
version (container hash) | f0802614d18c08b916f0d0434623401b |
build date | 2018-06-26T14:29:40.066Z |
size (MB) | 1898 |
size (bytes) | 1460404255 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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