motroy/singularity-removeHost:latest

$ singularity pull shub://motroy/singularity-removeHost:latest

Singularity Recipe

Bootstrap: docker
From: ubuntu:16.04

%environment
export PATH="/Software/bwa:/Databases/:$PATH"

%post
apt update && apt install -y git curl wget less locate unzip build-essential zlib1g-dev bedtools samtools
mkdir -p /Software/ && cd /Software/
git clone https://github.com/lh3/bwa.git
cd bwa
make
mkdir -p /Databases/ && cd /Databases
export PATH="/Software/bwa:/Databases/:$PATH"
#wget -q -O hg19_main_mask_ribo_animal_allplant_allfungus.fa.gz #https://zenodo.org/record/1208052/files/hg19_main_mask_ribo_animal_allplant_allfungus.fa.gz
#gunzip hg19_main_mask_ribo_animal_allplant_allfungus.fa.gz
#/Software/bwa/bwa index /Databases/hg19_main_mask_ribo_animal_allplant_allfungus.fa

Collection


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Metrics

key value
id /containers/motroy-singularity-removeHost-latest
collection name motroy/singularity-removeHost
branch master
tag latest
commit 4e40943986fdadbceb65501aa62a4138526dc5dc
version (container hash) e815ba0bd53db2e51a09b1477ad7c71f
build date 2019-05-13T10:27:31.198Z
size (MB) 370
size (bytes) 146628639
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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