motroy/singularity-kaiju-progen:latest

$ singularity pull shub://motroy/singularity-kaiju-progen:latest

Singularity Recipe

Bootstrap: docker
From: ubuntu:latest

%environment
export PATH="/Software/kaiju/bin:/Software/kaiju/databases$PATH"


%post
mkdir /Software && cd /Software
apt update && apt install -y git curl wget less locate build-essential openssh-server g++ libz-dev

git clone https://github.com/bioinformatics-centre/kaiju.git
cd kaiju/src && make
mkdir /Software/kaiju/databases && cd /Software/kaiju/databases
#wget http://kaiju.binf.ku.dk/database/kaiju_db_progenomes_2019-02-05.tgz
#tar xvf http://kaiju.binf.ku.dk/database/kaiju_db_progenomes_2019-02-05.tgz
export PATH="/Software/kaiju/bin:/Software/kaiju/databases$PATH"

Collection


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Metrics

key value
id /containers/motroy-singularity-kaiju-progen-latest
collection name motroy/singularity-kaiju-progen
branch master
tag latest
commit faf8ac1de208db84f1f133ddd63fe42fcdefccf6
version (container hash) 76a5ad90e532a65f888473ed26575efe
build date 2020-07-10T21:12:41.711Z
size (MB) 468
size (bytes) 164663327
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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