mcw-rcc/mitograph:latest

$ singularity pull shub://mcw-rcc/mitograph:latest

Singularity Recipe

BootStrap: docker
From: ubuntu:16.04

%labels
    Maintainer Matthew Flister

%help
    This container runs Mitograph.

%post
    # add paths
    mkdir -p /scratch/global /scratch/local /rcc/stor1/refdata /rcc/stor1/depts /rcc/stor1/projects
  
    apt-get update && apt-get install -y --no-install-recommends \
        build-essential \
        gcc-multilib \
        cmake \
        wget \
        freeglut3-dev \
        git \
        ca-certificates
    apt-get clean

    wget https://www.vtk.org/files/release/8.2/VTK-8.2.0.tar.gz
    tar -xvf VTK-8.2.0.tar.gz && cd VTK-8.2.0
    mkdir build && cd build
    cmake .. && make && make install
    cd ~/ && rm -rf VTK-8.2.0*

    git clone https://github.com/vianamp/MitoGraph.git
    cd MitoGraph && sed -i 's/VTK 7.0/VTK 8.2.0/g' CMakeLists.txt
    mkdir build && cd build
    cmake .. && make && cp MitoGraph /usr/local/bin
    cd ~/ && rm -rf MitoGraph

Collection


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key value
id /containers/mcw-rcc-mitograph-latest
collection name mcw-rcc/mitograph
branch master
tag latest
commit 845cedfff7e5c1ed0bb1490f3c08fe01ca18bac4
version (container hash) 50c348ee2b50f946a5be5fe8d4924a97
build date 2019-03-29T19:18:16.083Z
size (MB) 2495
size (bytes) 672595999
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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