mcw-meier-lab/Singularity:fsl
$ singularity pull shub://mcw-meier-lab/Singularity:fsl
Singularity Recipe
Bootstrap: docker
From: ubuntu:16.04
%labels
Maintainer Lezlie Espana
Version v1.0
%help
This is a test container for installing FSL version 5.0.11.
%environment
export PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
%files
fslinstaller.py /usr/local/
%post
mkdir -p /scratch/global /scratch/local
apt-get update && apt-get install -y git \
build-essential \
gcc-multilib \
curl \
bc \
wget \
tcsh \
python
python /usr/local/fslinstaller.py -V 5.0.11 -D -d /usr/local/fsl
echo '. /usr/local/fsl/etc/fslconf/fsl.sh' >> /usr/local/.bashrc
echo 'export PATH=/usr/local/fsl/bin:$PATH' >> $SINGULARITY_ENVIRONMENT
chmod +x /usr/local/fsl/etc/fslconf/fsl.sh
exec /usr/local/fsl/etc/fslconf/fsl.sh
apt-get clean
rm -rf /var/lib/apt/lists/*
Collection
- Name: mcw-meier-lab/Singularity
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/mcw-meier-lab-Singularity-fsl |
collection name | mcw-meier-lab/Singularity |
branch | master |
tag | fsl |
commit | 5e51bb88a5e3a75c894b8dfd0cd8cd1add3af8c0 |
version (container hash) | 907388919cf6651ff32aa4558bb9435a |
build date | 2019-04-16T01:22:32.913Z |
size (MB) | 9130 |
size (bytes) | 4086022175 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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