mcw-meier-lab/Singularity:fsl

$ singularity pull shub://mcw-meier-lab/Singularity:fsl

Singularity Recipe

Bootstrap: docker
From: ubuntu:16.04

%labels
    Maintainer Lezlie Espana
    Version v1.0

%help
    This is a test container for installing FSL version 5.0.11.

%environment
    export PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin

%files
    fslinstaller.py /usr/local/

%post
    mkdir -p /scratch/global /scratch/local
    apt-get update && apt-get install -y git \
        build-essential \
        gcc-multilib \
        curl \
        bc \
        wget \
        tcsh \
        python

    python /usr/local/fslinstaller.py -V 5.0.11 -D -d /usr/local/fsl
    echo '. /usr/local/fsl/etc/fslconf/fsl.sh' >> /usr/local/.bashrc
    echo 'export PATH=/usr/local/fsl/bin:$PATH' >> $SINGULARITY_ENVIRONMENT
    chmod +x /usr/local/fsl/etc/fslconf/fsl.sh
    exec /usr/local/fsl/etc/fslconf/fsl.sh

    apt-get clean
    rm -rf /var/lib/apt/lists/*

Collection


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Metrics

key value
id /containers/mcw-meier-lab-Singularity-fsl
collection name mcw-meier-lab/Singularity
branch master
tag fsl
commit 5e51bb88a5e3a75c894b8dfd0cd8cd1add3af8c0
version (container hash) 907388919cf6651ff32aa4558bb9435a
build date 2019-04-16T01:22:32.913Z
size (MB) 9130
size (bytes) 4086022175
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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