mcw-meier-lab/Singularity:dcm2niix
$ singularity pull shub://mcw-meier-lab/Singularity:dcm2niix
Singularity Recipe
Bootstrap: docker
From: ubuntu:16.04
%labels
Maintainer Lezlie Espana
Version v1.0
%help
This is a test container for installing dcm2niix.
%post
mkdir -p /scratch/global /scratch/local
apt-get update && apt-get install -y git \
build-essential \
gcc-multilib \
curl \
bc \
wget \
tcsh \
python \
cmake \
pkg-config
#dcm2niix
git clone https://github.com/rordenlab/dcm2niix.git
cd dcm2niix && mkdir build && cd build
cmake ..
make install
echo 'export PATH=/dcm2niix/build/bin:$PATH' >> $SINGULARITY_ENVIRONMENT
export PATH=/dcm2niix/build/bin:$PATH
apt-get update
apt-get clean
rm -rf /var/lib/apt/lists/*
Collection
- Name: mcw-meier-lab/Singularity
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/mcw-meier-lab-Singularity-dcm2niix |
collection name | mcw-meier-lab/Singularity |
branch | master |
tag | dcm2niix |
commit | 9ad4e4abe3c43ca5ce5292fefa5482ba4f7a8785 |
version (container hash) | 5198cd813a6806e3ef33425d7cbfe05e |
build date | 2019-01-04T07:48:36.634Z |
size (MB) | 519 |
size (bytes) | 203509791 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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