mbhall88/Singularity_recipes:mummer
$ singularity pull shub://mbhall88/Singularity_recipes:mummer
Singularity Recipe
Bootstrap: debootstrap
OSVersion: bionic
MirrorURL: http://us.archive.ubuntu.com/ubuntu/
%environment
PATH=/usr/local/bin:$PATH
%post
apt update
apt install -y software-properties-common
apt-add-repository universe
apt update
apt install -y git wget build-essential
export LC_ALL=C.UTF-8
export LANG=C.UTF-8
echo 'export LC_ALL=C.UTF-8' >> $SINGULARITY_ENVIRONMENT
echo 'export LANG=C.UTF-8' >> $SINGULARITY_ENVIRONMENT
# ========================
# INSTALL mummer
# ========================
apt install -y csh
VERSION="3.23"
URL=https://sourceforge.net/projects/mummer/files/mummer/"$VERSION"/MUMmer"$VERSION".tar.gz/download
wget -O - "$URL" | tar xzf -
cd MUMmer*
make install
echo "export PATH=$(pwd):$PATH" >> $SINGULARITY_ENVIRONMENT
Collection
- Name: mbhall88/Singularity_recipes
- License: MIT License
View on Datalad
Metrics
key | value |
---|---|
id | /containers/mbhall88-Singularity_recipes-mummer |
collection name | mbhall88/Singularity_recipes |
branch | master |
tag | mummer |
commit | 442878c964afcaa4c5ddd19c17cccee6cc010974 |
version (container hash) | f269bcc949b591e03b57ce1d6fa1b778 |
build date | 2018-11-11T00:03:03.114Z |
size (MB) | 620 |
size (bytes) | 226455583 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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