maxemil/ALE-pipeline:latest
$ singularity pull shub://maxemil/ALE-pipeline:latest
Singularity Recipe
Bootstrap: docker
From: debian:jessie
%post
#### install system dependencies
apt-get update
apt-get clean
apt-get install --no-install-recommends -qy \
cmake \
g++-4.9 \
git \
libboost-all-dev \
make \
python3 \
wget
#### install bpp
cd /opt/
echo "deb http://biopp.univ-montp2.fr/repos/apt/ Trusty main" >> /etc/apt/sources.list;
wget http://biopp.univ-montp2.fr/repos/apt/conf/biopp.gpg.key
apt-key add biopp.gpg.key
apt-get update
apt-get install -qy libbpp-phyl-dev
#### compile and install ALE
git clone git://github.com/ssolo/ALE /usr/local/ALE
mkdir /usr/local/ALE/build
cd /usr/local/ALE/build
echo "export LD_LIBRARY_PATH=/usr/local/lib/" >> $SINGULARITY_ENVIRONMENT
cmake .. -DCMAKE_CXX_COMPILER=/usr/bin/g++-4.9 && make -j 4
for binary in /usr/local/ALE/build/bin/*; do ln -s $binary /usr/local/bin/; done
%labels
Maintainer max-emil.schon@icm.uu.se
Collection
- Name: maxemil/ALE-pipeline
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/maxemil-ALE-pipeline-latest |
collection name | maxemil/ALE-pipeline |
branch | master |
tag | latest |
commit | d33481b2b7b453caaaa03b3d16afffe16f77a4c5 |
version (container hash) | bb6fbe7100bafa91e4a8e49e88094e0f |
build date | 2020-08-13T13:48:02.942Z |
size (MB) | 1062 |
size (bytes) | 366252063 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
Feedback
Was this page helpful?
Glad to hear it! Please tell us how we can improve.
Sorry to hear that. Please tell us how we can improve.