marchoeppner/MECAT2:latest

$ singularity pull shub://marchoeppner/MECAT2:latest

Singularity Recipe

Bootstrap:docker
From:ubuntu:19.04

%labels
    MAINTAINER Marc Hoeppner <m.hoeppner@ikmb.uni-kiel.de>
    DESCRIPTION Singularity image containing Mecat2
    VERSION 0.1

%environment
    PATH=/opt/mecat2/Linux-amd64/bin:$PATH
    export PATH
    LC_ALL=en_US.UTF-8
    export LC_ALL
    LANG=en_US.UTF-8
    export LANG

%files

%post

apt-get -y update
apt-get -y install wget build-essential perl coreutils locales

locale-gen en_US.UTF-8
update-locale LANG=en_US.UTF-8

cd /opt

wget https://github.com/xiaochuanle/MECAT2/releases/download/20192026/mecat2_20190226_linuax_amd64.tar.gz
tar -xvf mecat2_20190226_linuax_amd64.tar.gz
rm mecat2_20190226_linuax_amd64.tar.gz
mv MECAT2 mecat2

Collection


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Metrics

key value
id /containers/marchoeppner-MECAT2-latest
collection name marchoeppner/MECAT2
branch master
tag latest
commit 1706b3463ec5a8274deb3485887c14d91a44c4b4
version (container hash) 9af9ceb6e814691c4255498efc81d8ca
build date 2019-05-10T10:48:53.620Z
size (MB) 354
size (bytes) 128639007
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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