marcc-hpc/deepTools:latest

$ singularity pull shub://marcc-hpc/deepTools:latest

Singularity Recipe

Bootstrap: docker
From: quay.io/bgruening/galaxy-deeptools

%environment
  # use bash as default shell
  SHELL=/bin/bash
  export SHELL

%setup
  # runs on host - the path to the image is $SINGULARITY_ROOTFS

%post
  # post-setup script

  # load environment variables
  . /environment

  # use bash as default shell
  echo 'SHELL=/bin/bash' >> /environment

  # make environment file executable
  chmod +x /environment

  # default mount paths
  mkdir -p /scratch /data 

%runscript
  # executes with the singularity run command
  # delete this section to use existing docker ENTRYPOINT command

%test
  # test that script is a success

Collection


View on Datalad

Metrics

key value
id /containers/marcc-hpc-deepTools-latest
collection name marcc-hpc/deepTools
branch master
tag latest
commit 692c25866e6244e457aacf834f47efefc1465fa3
version (container hash) 096b12b388caa821ad793209406781ba
build date 2020-05-27T14:35:23.227Z
size (MB) 4173
size (bytes) 1204170783
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
We cannot guarantee that all containers will still exist on GitHub.