marcc-hpc/atac-seq:latest

$ singularity pull shub://marcc-hpc/atac-seq:latest

Singularity Recipe

Bootstrap: docker
From: zhanglab/atac-seq:base

%environment
  # use bash as default shell
  SHELL=/bin/bash
  export SHELL

%setup
  # runs on host - the path to the image is $SINGULARITY_ROOTFS

%post
  # post-setup script

  # load environment variables
  . /environment

  # use bash as default shell
  echo 'SHELL=/bin/bash' >> /environment

  # make environment file executable
  chmod +x /environment

  # default mount paths
  mkdir /scratch /data 

%runscript
  # executes with the singularity run command
  # delete this section to use existing docker ENTRYPOINT command

%test
  # test that script is a success

Collection


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Metrics

key value
id /containers/marcc-hpc-atac-seq-latest
collection name marcc-hpc/atac-seq
branch master
tag latest
commit 98a61eef2cf19dc76ae1800e5066f78e53e2e125
version (container hash) a6f2c34a44b0444a227e9ba5300a1be9
build date 2018-01-31T15:33:59.020Z
size (MB) 2912
size (bytes) 1189576735
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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