magland/ml_ephys:v0.2.4

$ singularity pull shub://magland/ml_ephys:v0.2.4

Singularity Recipe

Bootstrap: docker
FROM: continuumio/miniconda3:latest

%labels
    Maintainer Jeremy Magland
    Version 0.1.0

%setup
  mkdir ${SINGULARITY_ROOTFS}/working
  cp -r . ${SINGULARITY_ROOTFS}/working/src

%post
  echo "################################## Activating conda environment"
  . /opt/conda/etc/profile.d/conda.sh
  conda create -n env1
  conda activate env1

  echo "################################## Installing MountainLab"
  conda install -c flatiron -c conda-forge mountainlab

  echo "################################## Installing Python"
  conda install python=3.6

  echo "################################## Installing ML package"
  pip install /working/src
  ml-link-python-module ml_ephys `ml-config package_directory`/ml_ephys

  echo "################################## Testing package"
  ml-list-processors

%environment
  . /opt/conda/etc/profile.d/conda.sh
  conda activate env1

Collection


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Metrics

key value
id /containers/magland-ml_ephys-v0.2.4
collection name magland/ml_ephys
branch master
tag v0.2.4
commit 7a4ba8ca8a3ba933cb86d6c3dfe11139daf73ed2
version (container hash) f4f1a9a9aa8bbe0262d9895821f9d6d2
build date 2018-08-30T14:39:42.931Z
size (MB) 1241
size (bytes) 489197599
SIF Download URL (please use pull with shub://)
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