mafreitas/singularity-openms:dependencies

$ singularity pull shub://mafreitas/singularity-openms:dependencies

Singularity Recipe

BootStrap: docker
From: ubuntu:trusty

%environment
LD_LIBRARY_PATH=/usr/local/lib/:$LD_LIBRARY_PATH

%post
apt-get -y update
apt-get install -y --no-install-recommends --no-install-suggests g++ autoconf patch libtool make git g++ automake
apt-get install -y --no-install-recommends --no-install-suggests software-properties-common python-software-properties
apt-get clean
apt-get purge
rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/*

add-apt-repository ppa:george-edison55/cmake-3.x
apt-get -y update
apt-get install -y cmake
apt-get clean
apt-get purge
rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/*

# install build dependencies: qt, libsvm, glpk
apt-get -y update
apt-get install -y cmake
apt-get install -y --no-install-recommends --no-install-suggests qt4-dev-tools qt4-default qt4-qtconfig qt4-qmake
apt-get install -y --no-install-recommends --no-install-suggests libqt4-dev libqt4-opengl-dev libqt4-svg
apt-get install -y --no-install-recommends --no-install-suggests libqtwebkit4 libqtwebkit-dev
apt-get install -y --no-install-recommends --no-install-suggests libsvm-dev libglpk-dev libzip-dev zlib1g-dev libxerces-c-dev libbz2-dev
apt-get install -y --no-install-recommends --no-install-suggests libboost-date-time-dev \
                                 libboost-iostreams-dev \
                                 libboost-regex-dev \
                                 libboost-math-dev \
                                 libboost-random-dev
apt-get clean
apt-get purge
rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/*

Collection

• Name: mafreitas/singularity-openms
• License: None

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