lscsoft/bilby_pipe:dev

$ singularity pull shub://lscsoft/bilby_pipe:dev

Singularity Recipe

Bootstrap: docker
From: bilbydev/bilby-test-suite-python37

%help
A singularity container for running bilby_pipe with the development versions
of bilby, bilby_pipe, and pesummary as of 2019-02-13.

%post
export PATH=/opt/conda/bin:${PATH}
pip install numpy==1.15
pip install pandas==0.23
pip install ligo-gracedb
pip install pesummary==0.1.4.dev1902182
git clone https://github.com/lscsoft/bilby.git
(cd bilby && python setup.py install)
git clone https://github.com/lscsoft/bilby_pipe.git
(cd bilby_pipe && python setup.py install)

%runscript
    bilby_pipe "$@" --singularity-image "$SINGULARITY_CONTAINER"

%apprun generation
    bilby_pipe_generation "$@"

%apprun analysis
    bilby_pipe_analysis "$@"

%apprun create_injection_file
    bilby_pipe_create_injection_file "$@"

Collection

• Name: lscsoft/bilby_pipe
• License: MIT License

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