khanlab/neuroglia-dwi:v1.3.1

$ singularity pull shub://khanlab/neuroglia-dwi:v1.3.1

Singularity Recipe

Bootstrap: shub
From: khanlab/neuroglia-core:v1.3.1


%labels
Maintainer "Ali Khan"

#########
%setup
#########
mkdir -p $SINGULARITY_ROOTFS/src
cp -Rv . $SINGULARITY_ROOTFS/src

#########
%post
#########


export DEBIAN_FRONTEND=noninteractive
cd /src/install_scripts
bash 21.install_MRtrix3_by_source_sudo.sh /opt
bash 28.install_camino_by_source.sh /opt
bash 29.install_unring_by_binary.sh /opt
bash 30.install_dke_by_binary.sh /opt

rm -rf /src

#########
%environment


#MRtrix3
export PATH=/opt/mrtrix3/bin:$PATH


#camino
export PATH=/opt/camino/bin:$PATH
export LD_LIBRARY_PATH=/opt/camino/lib:$LD_LIBRARY_PATH
export MANPATH=/opt/camino/lib:$MANPATH
export CAMINO_HEAP_SIZE=32000

#unring
export PATH=/opt/unring/bin:$PATH


#dke
export PATH=/opt/dke:$PATH
export LC_ALL=C

Collection


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Metrics

key value
id /containers/khanlab-neuroglia-dwi-v1.3.1
collection name khanlab/neuroglia-dwi
branch master
tag v1.3.1
commit 2e22aad74e2a1ac1039e0b26a29247eaa167dec9
version (container hash) c5ad887e5a3483ac3eba2cb2a2fdf076
build date 2018-05-27T16:15:46.757Z
size (MB) 15194
size (bytes) 6057144351
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
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