khanlab/diffparc-sumo:v0.0.1e

$ singularity pull shub://khanlab/diffparc-sumo:v0.0.1e

Singularity Recipe

Bootstrap: shub
From: akhanf/vasst-dev:v0.0.4e


#########
%setup
#########
mkdir $SINGULARITY_ROOTFS/diffparcellate
cp -Rv . $SINGULARITY_ROOTFS/diffparcellate


cp -v matlab/*.m $SINGULARITY_ROOTFS/opt/vasst-dev/tools/matlab
cp -v processBedpostParcellateSeedfromPrepDWI $SINGULARITY_ROOTFS/opt/vasst-dev/pipeline/dwi
cp -v deps/mris_convert $SINGULARITY_ROOTFS/opt/freesurfer_minimal/bin

#remove older compiled version, superceded by script in matlab folder..
rm -vf $SINGULARITY_ROOTFS/opt/vasst-dev/mcr/v92/genBYUtoNiftiTransformFromCroppedAnalyze



%runscript
exec /diffparcellate/run.sh $@

Collection


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Metrics

key value
id /containers/khanlab-diffparc-sumo-v0.0.1e
collection name khanlab/diffparc-sumo
branch master
tag v0.0.1e
commit 5a6dbb1d95cd916068ade55ec7ecd7e095123e91
version (container hash) 99f6840d75885d73a97c7bf82b156d87
build date 2018-10-16T23:20:45.484Z
size (MB) 11332
size (bytes) 5172973599
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
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