jlboat/BioinfoContainers:trimmomatic
$ singularity pull shub://jlboat/BioinfoContainers:trimmomatic
Singularity Recipe
Bootstrap: docker
From: ubuntu:latest
%post
apt-get update --fix-missing && apt-get install -y wget
apt-get install -y zip
apt-get install -y default-jre
wget --quiet http://www.usadellab.org/cms/uploads/supplementary/Trimmomatic/Trimmomatic-0.38.zip -O /opt/Trimmomatic-0.38.zip
unzip /opt/Trimmomatic-0.38.zip
%runscript
exec java -jar /Trimmomatic-0.38/trimmomatic-0.38.jar "$@"
Collection
- Name: jlboat/BioinfoContainers
- License: MIT License
View on Datalad
Metrics
key | value |
---|---|
id | /containers/jlboat-BioinfoContainers-trimmomatic |
collection name | jlboat/BioinfoContainers |
branch | master |
tag | trimmomatic |
commit | 5f15386e1057282311ce1b4a7cae3f747425ed6b |
version (container hash) | 5ce48ddf51d112b4a96f6ce95aba8c57 |
build date | 2021-03-06T01:04:48.545Z |
size (MB) | 504 |
size (bytes) | 188510239 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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