jlboat/BioinfoContainers:samtools
$ singularity pull shub://jlboat/BioinfoContainers:samtools
Singularity Recipe
Bootstrap: docker
From: ubuntu:latest
%post
apt-get update --fix-missing && apt-get install -y wget make zlib1g-dev gcc \
pkg-config autoconf libncurses5-dev libbz2-dev liblzma-dev libcurl4-gnutls-dev libssl-dev
cd /opt/
wget --quiet https://github.com/samtools/samtools/releases/download/1.9/samtools-1.9.tar.bz2
tar xvfj samtools-1.9.tar.bz2
rm samtools-1.9.tar.bz2
cd samtools-1.9
./configure
make
make install
chmod -R 777 /opt/*
%runscript
exec samtools "$@"
Collection
- Name: jlboat/BioinfoContainers
- License: MIT License
View on Datalad
Metrics
key | value |
---|---|
id | /containers/jlboat-BioinfoContainers-samtools |
collection name | jlboat/BioinfoContainers |
branch | master |
tag | samtools |
commit | 5f15386e1057282311ce1b4a7cae3f747425ed6b |
version (container hash) | c84f59ff4a9044323908da588663c150 |
build date | 2019-05-08T15:11:14.483Z |
size (MB) | 441 |
size (bytes) | 153260063 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
Feedback
Was this page helpful?
Glad to hear it! Please tell us how we can improve.
Sorry to hear that. Please tell us how we can improve.