jlboat/BioinfoContainers:hisat2

$ singularity pull shub://jlboat/BioinfoContainers:hisat2

Singularity Recipe

Bootstrap: docker

From: debian:latest

%environment
    PATH=$PATH:/hisat2-2.1.0

%post
    apt-get update --fix-missing && apt-get install -y wget unzip python
    apt-get clean && apt-get purge
    wget http://ccb.jhu.edu/software/hisat2/dl/hisat2-2.1.0-Linux_x86_64.zip
    unzip hisat2-2.1.0-Linux_x86_64.zip

%runscript
    exec "$@"

Collection


View on Datalad

Metrics

key value
id /containers/jlboat-BioinfoContainers-hisat2
collection name jlboat/BioinfoContainers
branch master
tag hisat2
commit 5f15386e1057282311ce1b4a7cae3f747425ed6b
version (container hash) 5d6d9cd8106d7ba1681d98c5ccb4b661
build date 2019-09-24T17:55:41.866Z
size (MB) 277
size (bytes) 124588063
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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