jlboat/BioinfoContainers:fastqc

$ singularity pull shub://jlboat/BioinfoContainers:fastqc

Singularity Recipe

Bootstrap: docker

From: ubuntu:latest

%post
    apt-get update --fix-missing && apt-get install -y wget
    apt-get install -y zip default-jre perl
    wget --quiet https://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.11.8.zip -O /opt/fastqc_v0.11.8.zip
    unzip /opt/fastqc_v0.11.8.zip
    rm /opt/fastqc_v0.11.8.zip
    chmod a+x /FastQC/fastqc

%runscript
    exec /FastQC/fastqc "$@"

Collection


View on Datalad

Metrics

key value
id /containers/jlboat-BioinfoContainers-fastqc
collection name jlboat/BioinfoContainers
branch master
tag fastqc
commit 5f15386e1057282311ce1b4a7cae3f747425ed6b
version (container hash) d9971b3acc1d414066f3b7e9396a972f
build date 2021-03-06T01:05:19.949Z
size (MB) 559
size (bytes) 207487007
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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