jlboat/BioinfoContainers:fastqc
$ singularity pull shub://jlboat/BioinfoContainers:fastqc
Singularity Recipe
Bootstrap: docker
From: ubuntu:latest
%post
apt-get update --fix-missing && apt-get install -y wget
apt-get install -y zip default-jre perl
wget --quiet https://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.11.8.zip -O /opt/fastqc_v0.11.8.zip
unzip /opt/fastqc_v0.11.8.zip
rm /opt/fastqc_v0.11.8.zip
chmod a+x /FastQC/fastqc
%runscript
exec /FastQC/fastqc "$@"
Collection
- Name: jlboat/BioinfoContainers
- License: MIT License
View on Datalad
Metrics
key | value |
---|---|
id | /containers/jlboat-BioinfoContainers-fastqc |
collection name | jlboat/BioinfoContainers |
branch | master |
tag | fastqc |
commit | 5f15386e1057282311ce1b4a7cae3f747425ed6b |
version (container hash) | d9971b3acc1d414066f3b7e9396a972f |
build date | 2021-03-06T01:05:19.949Z |
size (MB) | 559 |
size (bytes) | 207487007 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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