jlboat/BioinfoContainers:conda_env

$ singularity pull shub://jlboat/BioinfoContainers:conda_env

Singularity Recipe

Bootstrap: docker

From: continuumio/miniconda3

%files
    environment.yml

%environment
    PATH=/opt/conda/envs/$(head -1 environment.yml | cut -d' ' -f2)/bin:$PATH

%post
    echo ". /opt/conda/etc/profile.d/conda.sh" >> ~/.bashrc
    echo "source activate $(head -1 environment.yml | cut -d' ' -f2)" > ~/.bashrc
    /opt/conda/bin/conda env create -f environment.yml
    /opt/conda/bin/conda clean -a

%runscript
    exec "$@"

Collection


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Metrics

key value
id /containers/jlboat-BioinfoContainers-conda_env
collection name jlboat/BioinfoContainers
branch master
tag conda_env
commit 5f15386e1057282311ce1b4a7cae3f747425ed6b
version (container hash) 0593853296b0f0b7ddcca67e6ff30b8d
build date 2019-05-08T15:11:14.002Z
size (MB) 2769
size (bytes) 908828703
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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