jdwheaton/singularity-ngs:sra_tools

$ singularity pull shub://jdwheaton/singularity-ngs:sra_tools

Singularity Recipe

Bootstrap: docker
From: centos:7

%post
	# Install required build tools
    yum -y update
    yum -y install tar wget
    cd /
    wget http://ftp-trace.ncbi.nlm.nih.gov/sra/sdk/2.9.0/sratoolkit.2.9.0-centos_linux64.tar.gz
    tar -xvzf sratoolkit.2.9.0-centos_linux64.tar.gz
    rm sratoolkit.2.9.0-centos_linux64.tar.gz
    
%environment
	export PATH=$PATH:/sratoolkit.2.9.0-centos_linux64/bin

Collection


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Metrics

key value
id /containers/jdwheaton-singularity-ngs-sra_tools
collection name jdwheaton/singularity-ngs
branch master
tag sra_tools
commit c340d120f62540d323bba7f282da8f7d2b0347f6
version (container hash) 2444e8a881a655c7adb0d10c7d3e777a
build date 2018-05-20T23:46:11.593Z
size (MB) 564
size (bytes) 172896287
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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