jacobhepkema/scanem-r:latest
$ singularity pull shub://jacobhepkema/scanem-r:latest
Singularity Recipe
Bootstrap: docker
From: rocker/r-ver:3.6.0
%labels
Maintainer @jacobhepkema
Version v0.1
%post
apt-get update && apt-get install -y --no-install-recommends procps lbzip2 libhdf4-alt-dev libhdf5-dev libxml-parser-perl && install2.r --error BiocManager optparse stringr pracma hashmap reshape2 ggplot2 dplyr viridis gridExtra igraph ade4 && R -e "BiocManager::install(c('rhdf5', 'pheatmap', 'Biostrings', 'ggseqlogo', 'ggrepel', 'DelayedMatrixStats', 'xtable'), update=FALSE, ask=FALSE)"
# smoke test
R --version
%runscript
exec Rscript "$@"
Collection
- Name: jacobhepkema/scanem-r
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/jacobhepkema-scanem-r-latest |
collection name | jacobhepkema/scanem-r |
branch | master |
tag | latest |
commit | b3a9904f2c02118ac45617a5bc366d60a95c12e6 |
version (container hash) | fe5406cae559ddc46ad733deec7ee27d |
build date | 2021-03-11T15:21:29.124Z |
size (MB) | 1228.0 |
size (bytes) | 425115679 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
Feedback
Was this page helpful?
Glad to hear it! Please tell us how we can improve.
Sorry to hear that. Please tell us how we can improve.