ii-bioinfo/ii-chipseq:app

$ singularity pull shub://ii-bioinfo/ii-chipseq:app

Singularity Recipe

From:continuumio/miniconda:4.5.4
Bootstrap:docker

%labels
    MAINTAINER Lukas Lueftinger <lukas.lueftinger@imp.ac.at>
    DESCRIPTION Container image containing all binary dependencies for the ii-chipseq pipeline
    VERSION 0.1dev


##############################
# py2
##############################

%appenv py2
    PATH=/opt/conda/envs/ii-bioinfo-py2/bin:$PATH
    export PATH

%appfiles py2
    environment_py2.yaml /

%appinstall py2
    apt-get install -y ttf-liberation procps
    /opt/conda/bin/conda env create -f /scif/apps/py2/environment_py2.yaml
    /opt/conda/bin/conda clean -a


##############################
# py3
##############################

%appenv py3
    PATH=/opt/conda/envs/ii-bioinfo-py3/bin:$PATH
    export PATH

%appfiles py3
    environment_py3.yaml /

%appinstall py3
    apt-get install -y procps
    /opt/conda/bin/conda env create -f /scif/apps/py3/environment_py3.yaml
    /opt/conda/bin/conda clean -a

Collection


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Metrics

key value
id /containers/ii-bioinfo-ii-chipseq-app
collection name ii-bioinfo/ii-chipseq
branch master
tag app
commit acf2f9bcd31802923c18c7f95064653c6c22e234
version (container hash) ab5f2c3857c746c3825a0bca7920b41f
build date 2018-11-19T08:23:52.047Z
size (MB) 5992
size (bytes) 1927344159
SIF Download URL (please use pull with shub://)
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