ii-bioinfo/ii-chipseq:app
$ singularity pull shub://ii-bioinfo/ii-chipseq:app
Singularity Recipe
From:continuumio/miniconda:4.5.4
Bootstrap:docker
%labels
MAINTAINER Lukas Lueftinger <lukas.lueftinger@imp.ac.at>
DESCRIPTION Container image containing all binary dependencies for the ii-chipseq pipeline
VERSION 0.1dev
##############################
# py2
##############################
%appenv py2
PATH=/opt/conda/envs/ii-bioinfo-py2/bin:$PATH
export PATH
%appfiles py2
environment_py2.yaml /
%appinstall py2
apt-get install -y ttf-liberation procps
/opt/conda/bin/conda env create -f /scif/apps/py2/environment_py2.yaml
/opt/conda/bin/conda clean -a
##############################
# py3
##############################
%appenv py3
PATH=/opt/conda/envs/ii-bioinfo-py3/bin:$PATH
export PATH
%appfiles py3
environment_py3.yaml /
%appinstall py3
apt-get install -y procps
/opt/conda/bin/conda env create -f /scif/apps/py3/environment_py3.yaml
/opt/conda/bin/conda clean -a
Collection
- Name: ii-bioinfo/ii-chipseq
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/ii-bioinfo-ii-chipseq-app |
collection name | ii-bioinfo/ii-chipseq |
branch | master |
tag | app |
commit | acf2f9bcd31802923c18c7f95064653c6c22e234 |
version (container hash) | ab5f2c3857c746c3825a0bca7920b41f |
build date | 2018-11-19T08:23:52.047Z |
size (MB) | 5992 |
size (bytes) | 1927344159 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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