ii-bioinfo/ii-chipseq:0.2dev

$ singularity pull shub://ii-bioinfo/ii-chipseq:0.2dev

Singularity Recipe

From:continuumio/miniconda:4.5.4
Bootstrap:docker

%labels
    MAINTAINER IMP/IMBA Bioinformatics and Lukas Lueftinger <lukas.lueftinger@imp.ac.at>
    DESCRIPTION Container image containing all binary dependencies for the ii-chipseq pipeline
    VERSION 0.2dev


##############################
# py2
##############################

%appenv py2
    PATH=/opt/conda/envs/ii-bioinfo-py2/bin:$PATH
    export PATH

%appfiles py2
    environment_py2.yaml /

%appinstall py2
    apt-get install -y ttf-liberation procps
    /opt/conda/bin/conda env create -f /scif/apps/py2/environment_py2.yaml
    /opt/conda/bin/conda clean -a

##############################
# py3
##############################

%appenv py3
    PATH=/opt/conda/envs/ii-bioinfo-py3/bin:$PATH
    export PATH

%appfiles py3
    environment_py3.yaml /

%appinstall py3
    apt-get install -y procps
    /opt/conda/bin/conda env create -f /scif/apps/py3/environment_py3.yaml
    /opt/conda/bin/conda clean -a

Collection


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Metrics

key value
id /containers/ii-bioinfo-ii-chipseq-0.2dev
collection name ii-bioinfo/ii-chipseq
branch dev
tag 0.2dev
commit bc858a5bbf1dd39a027aec25baba1035fdfd42c3
version (container hash) 698513c81929c67559fc50890d55de91
build date 2019-01-07T17:57:02.774Z
size (MB) 5539
size (bytes) 1923305503
SIF Download URL (please use pull with shub://)
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